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Author's personal copy                                                     315

C. Brugnano et al. / Journal of Marine Systems 81 (2010) 312–322

Fig. 3. Vertical trends of temperature, salinity, fluorescence and dissolved oxygen. Data were grouped by depth range according to plankton data analysis. Layers are indicated by
capital letters (see text for explanation).

most stations (i.e. 1, 2, 5, 6 stations): in fact, average temperatures in  areas (101.0 ± 25.4 and 16.8 ± 12.5 ind. m− 3, in neritic and pelagic
layer A were 22.59 ± 0.4 °C (N = 127) and 23.32 ± 0.26 °C (N = 111),        areas, respectively).
respectively.
                                                                                A total of 107 copepod species were identified in the investigated
    Moreover, the Depth of the Chlorophyll Maximum (DCM) was                area. The greatest number of species was found between 20–40 and
observed at about 40 m in station 10 coinciding with the intruding          40–60 m layers (87 and 78, respectively), whereas the lowest (19) in
MAW tongue, where the fluorescence maximum was recorded. In the              the 0–20 m one. Richness species (d) and species diversity (H′)
western-most open sea stations (stations 10, 11, and 12) the DCM            indices showed similar spatial trends along the study area, with
remains in layers A*/B, whereas on the Tyrrhenian side (stations 1 and      exception at 200–300 m depth, in which the former increased and the
6), it deepens to 60–65 m (layer C), probably due to mixing and             latter decreased, with respect to the foregoing 150–200 m layer
coastal influence. Dissolved oxygen showed a higher average value in         (Fig. 5). The lowest Shannon–Wiener index values (range: 2.4–2.9)
layer B.                                                                    occurred in the upper layer, corresponding to the maximum of
                                                                            abundances, the highest ones (ranging between 3.2 and 3.3) between
    In the ordination plane of physical–chemical data set (Fig. 4), PCA     40 and 80 m depth, due to neritic and intermediate pelagic copepod
showed a clear separation of coastal, neritic and pelagic surface waters    species overlapping. The highest richness species was shown from
(in the upper part of the graph) from subsurface and deeper ones (in        150 to 300 m layers (range: 17.9–51.6), in which occurred the lowest
the middle and lower part of the graph, respectively). PC1 and PC2          copepod abundances, the lowest one occurred in the upper layers
axes accounted for the greatest percentage (89.9%) of total variance.       (range: 15.8–23.1). The horizontal trend of diversity, calculated on the
Salinity showed the highest coefficients in the linear combination           integrated water column from 0 to 40 m depth, showed the highest
with PC1 (0.613) and temperatures with PC2 (0.774). Fluorescence            values of indices in the neritic area among the islands (81 species;
(chlorophyll a) showed a negative correlation (−0.521) with the             d = 22.0; H′ = 2.9), the lowest in coastal area (49 species; d = 11;
second axis. From BIO-ENV analysis resulted a high rank of correlation      H′ = 2.5), whereas intermediate values (64 species; d = 17.2; H′ = 2.8),
(Spearman's coefficient R = 0.847, p ≤ 1%) between biota and physico-        in the pelagic one.
chemical parameters. The best results were obtained relating copepod
species abundance data to temperature and salinity. However, high               Four groups of samples were determined by cluster analysis at 42%
correlation ranks were obtained also for temperature, salinity and          similarity level (Fig. 6), each one identifying a different area and/or
dissolved oxygen (0.76), Chl-a and temperature (0.74), and all              depth layer: I) surface water group in common between A and A*
parameters together (0.69).                                                 samples of coastal, neritic and pelagic areas; II) more heterogeneous
                                                                            subsurface water group, distributed preferentially along A*, B and C
3.2. Copepod assemblages                                                    samples, mainly, of neritic and pelagic areas; III) intermediate one
                                                                            from C–D to E samples, and IV) deeper water group (N200 m
    Copepods were the dominant group of zooplankton community,              samples). Therefore, A and A* (0–40 m) were considered as surface
representing on average the 75% of total zooplankton.                       layers, the layers B and C (40–80 m) as subsurface, the layers D and E
                                                                            (80–200 m) as intermediate and the layers F and G (200–600 m) as
    Total mean abundances (adult and copepodite stages) decrease            deep layers in the study area.
from 150.04 ind. m− 3 in the 0–20 m layer to 111.86 ind. m− 3 in the
60–80 m layer; a sharp decrease is clear below the later layer till             Four species accounted for 53% of similarity (SIMPER test) in
200 m (5.00 ind. m− 3) (Fig. 5).                                            sample group I: Clausocalanus furcatus (15.1%), Acartia negligens
                                                                            (14.0%), Temora stylifera (12.7%) and Oithona plumifera (11.2%). In
    The same trend was shown by the mean abundances (adult and              group II, six species accounted for 40% of similarity: Nannocalanus
copepodite stages) from inshore (262.0 ± 8.2 ind. m−3) to offshore          minor (7.9%), Centropages typicus (7.2%), Clausocalanus jobei (6.9%),
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