Page 7 - Chrysoula_al_2010

Historical dispersal of white sharks C. Gubili et al. 1685

16 Saidi, B., Bradai, M. N., Bouaı¨n, A., Gue ´lorget, O. & 34 Castro, A. L. F., Stewart, B. S., Wilson, S. G., Hueter,
Capepe ´, C. 2005 Capture of a pregnant female white R. E., Meekan, M. G., Motta, P. J., Bowen, B. W. &
shark, Carcharodon carcharias (Lamnidae) in the Gulf of Karl, S. A. 2007 Population genetic structure of earth’s
Gabe `s (southern Tunisia, central Mediterranean) with largest fish, the whale shark (Rhincodon typus). Mol.
comments on oophagy in sharks. Cybium 29, 303–307. Ecol. 16, 5183–5192. (doi:10.1111/j.1365-294X.2007.
17 Kabasakal, H. & Gedikog˘lu, S. 2008 Two new-born great 03597.x)
white sharks, Carcharodon carcharias (Linnaeus, 1758) 35 Schultz, J. K., Feldheim, K. A., Gruber, S. H., Ashley,
(Lamniformes; Lamnidae) from Turkish waters of the M. V., McGovern, T. M. & Bowen, B. W. 2008 Global
north Aegean Sea. Acta Adriat. 49, 125–135. phylogeography and seascape genetics of the lemon
18 Pardini, A. T. et al. 2001 Sex-biased dispersal of great sharks (genus Negaprion). Mol. Ecol. 17, 5336–5348.
white sharks. Nature 412, 139–140. (doi:10.1038/ (doi:10.1111/j.1365-294X.2008.04000.x)
35084125) 36 Portnoy, D. S., McDowell, J. R., Heist, E. J., Musick,
19 Jorgensen, S. et al. 2009 Philopatry and migration of J. A. & Graves, J. E. 2010 World phylogeography
Pacific white sharks. Proc. R. Soc. B 277, 679–688. and male-mediated gene flow in the sandbar shark,
(doi:10.1098/rspb.2009.1155) Carcharhinus plumbeus. Mol. Ecol. 19, 1994–2010.
20 Nasby-Lucas, N., Dewar, H., Lam, C. H., Goldman, (doi:10.1111/j.1365-294X.2010.04626.x)
K. J., Domeier, M. L. & Bograd, S. J. 2009 White 37 Por, F. D. 1971 One hundred years of Suez Canal—a
shark offshore habitat: a behavioral and environmental century of Lessepsian migration: retrospect and view-
characterization of the eastern Pacific shared offshore points. Syst. Zool. 20, 138–159. (doi:10.2307/2412054)
foraging area. PLoS ONE 4,e8163.(doi:10.1371/jour- 38 Bo ´nfil, R. & Abdallah, M. 2004 Field identification guide
nal.pone.0008163) to the sharks and rays of the Red Sea and Gulf of Aden.
21 Ferretti, F., Myers, R. A., Serena, F. & Lotze, H. K. 2008 In FAO species identification guide for fishery purposes.
Loss of large predatory sharks from the Mediterranean Sea. Rome, Italy: FAO.
Conserv. Biol. 22, 952–964. (doi:10.1111/j.1523-1739. 39 Moore, A. B. M., Compagno, L. J. V. & Fergusson, I. K.
2008.00938.x) 2007 The Persian/Arabian Gulf’s sole great white shark
22 Igle ´sias, S. P. 2009 Chondrichthyans from the North- Carcharodon carcharias (Lamniformes: Lamnidae)
eastern Atlantic and the Mediterranean (a natural record from Kuwait: misidentification of a sandtiger
classification based on collection specimens). Provisional shark Carcharias taurus (Lamniformes: Odontaspididae).
version 03, internet prepublication, 1 November 2009. Zootaxa 1591, 67–68.
See http://www.mnhn.fr/iccanam. 40 Zuffa, M., Van Grevelynghe, G., De Maddalena, A. &
23 Thompson, J. D., Gibson, T. J., Plewniak, F., Storai, T. 2002 Records of the white shark, Carcharodon
Jeanmougin, F. & Higgins, D. G. 1997 The ClustalX carcharias (Linnaeus, 1758), from the western Indian
Windows interface: flexible strategies for multiple Ocean. S. Afr. J. Sci. 98, 347–349.
sequence alignment aided by quality analysis tools. 41 Cliff, G., Compagno, L. J. V., Smale, M. J., van der Elst,
Nucleic Acids Res. 24, 4876–4882. R. P. & Wintner, S. P. 2000 First records of white sharks,
24 Excoffier, L., Laval, G. & Schneider, S. 2005 Arlequin Carcharodon carcharias, from Mauritius, Zanzibar,
v. 3.0: an integrated software package for population Madagascar, and Kenya. S. Afr. J. Sci. 96, 365–367.
genetics data analysis. Evol. Bioinform. Online 1, 47–50. 42 Cliff, G., Dudley, S. F. J. & Davis, B. 1989 Sharks caught
25 Bandelt, H. J., Forster, P. & Rohl, A. 1999 Median- in the protective gill nets off Natal, South Africa. 2. The
joining networks for inferring intraspecific phylogenies. great white shark Carcharodon carcharias (Linnaeus).
Mol. Biol. Evol. 16, 37–48. S. Afr. J. Mar. Sci. 8, 131–144.
26 Posada, D. & Crandall, K. A. 1998 Modeltest: testing the 43 Duncan, K. M., Martin, A. P., Bowen, B. W. &
model of DNA substitution. Bioinformatics 14, 817–818. De Couet, H. G. 2006 Global phylogeography of the
(doi:10.1093/bioinformatics/14.9.817) scallopedhammerheadshark (Sphyrna lewini). Mol. Ecol.
27 Huelsenbeck, J. P. & Ronquist, F. 2001 MrBayes: 15, 2239–2251. (doi:10.1111/j.1365-294X.2006.02933.x)
Bayesian inference of phylogenetic trees. Bioinformatics 44 Martin, A. P., Naylor, G. J. P. & Palumbi, S. R. 1992
17, 754–755. Rates of mitochondrial DNA evolution in sharks are
28 Guindon, S. & Gascuel, O. 2003 A simple, fast, and slow compared with mammals. Nature 357, 153–155.
accurate algorithm to estimate large phylogenies by (doi:10.1038/357153a0)
maximum likelihood. Syst. Biol. 52, 696–704. 45 Hofreiter, M. & Stewart, J. 2009 Ecological change,
29 Swofford, D. L. 2002 PAUP*: phylogenetic analysis using range fluctuations and population dynamics during the
parsimony (*and other methods), v. 4.0b10. Sunderland, Pleistocene. Curr. Biol. 19, R584–R594. (doi:10.1016/j.
MA: Sinauer Associates. cub.2009.06.030)
30 Librado, P. & Rozas, J. 2009 DNASP v5: a software 46 Peeters, F. J. C., Acheson, R., Brummer, G.-J. A.,
for comprehensive analysis of DNA polymorphism de Ruijter, W. P. M., Schneider, R. R., Ganssen,
data. Bioinformatics 25, 1451–1452. (doi:10.1093/ G. M., Ufkes, E. & Kroon, D. 2004 Vigorous exchange
bioinformatics/btp187) between the Indian and Atlantic oceans at the end of
31 Coates, A. G., Jackson, J. B. C., Collins, L. S., Cronin, the past five glacial periods. Nature 430, 661–665.
T. M., Dowsett, H. J., Bybell, L. M., Jung, P. & (doi:10.1038/nature02785)
Obando, J. A. 1992 Closure of the Isthmus of Panama; 47 Alvarado Bremer, J., Vinas, J., Mejuto, J., Ely, B. & Pla,
the near-shore marine record of Costa Rica and western C. 2005 Comparative phylogeography of Atlantic bluefin
Panama. Geol. Soc. Am. Bull. 104, 814–828. (doi:10. tuna and swordfish: the combined effects of vicariance,
1130/0016-7606(1992)104,0814:COTIOP.2.3.CO;2) secondary contact, introgression, and population
32 Haq, B. U., Hardenbol, J. & Vail, P. R. 1987 Chronology expansion on the regional phylogenies of two highly
of fluctuating sea levels since the Triassic. Science 235, migratory pelagic fishes. Mol. Phylogenet. Evol. 36,
1156–1167. (doi:10.1126/science.235.4793.1156) 169–187. (doi:10.1016/j.ympev.2004.12.011)
33 Hoelzel, A. R., Shivji, M. S., Magnussen, J. & Francis, 48 Schefuss, E., Sinninghe Damste, J. S. & Jansen, J. H. F.
M. P. 2006 Low worldwide genetic diversity in the 2004 Forcing of tropical Atlantic sea surface temperatures
basking shark (Cetorhinus maximus). Biol. Lett. 2, during the mid-Pleistocene transition. Paleoceanography 19,
639–642. (doi:10.1098/rsbl.2006.0513) A4029. P. (doi:10.1029/2003PA000892)
Proc. R. Soc. B (2011)