Page 3 - Isozyme_analysis_of_genetic_diversity2004
P. 3

139

               Table 1. Identification, geographical origin and size of Brassica populations investigated.
               Identification  Taxa                  Origin                              Size (number of individuals)
               pop1         B. villosa subsp. villosa  Monte Calcerame (Sagana) – Palermo  101–500
               pop2         B. villosa subsp. bivoniana  M. Inici – Trapani             501–1000
               pop3         B. villosa subsp. bivoniana  Caltabellotta – Agrigento      .1000
               pop4         B. villosa subsp. drepanensis  M. S. Giuliano - Erice - Trapani  .1000
               pop5         B. villosa subsp. bivoniana  C.da Serbatoio (Fontanarossa) - Trapani  11–50
               pop6         B. villosa subsp. tinei  P.lla Scalazza (Marianopoli)- Caltanissetta  501–1000
               pop7         B. rupestris subsp. rupestris  M. Pellegrino - Palermo      .1000
               pop8         B. rupestris subsp. rupestris  Rocca Busambra - Palermo     .1000
               pop9         B. rupestris subsp. rupestris  Stilo – Cosenza (Calabria)   51–100
               pop10        B. rupestris subsp. rupestris  M. Sferrovecchio (S. Ciro) – Palermo  51–100
               pop11        B. rupestris subsp. brevisiliqua  Capo San Vito (Isolidda) – Trapani  101–500
               pop12        B. rupestris subsp. hispida  M. Pizzuta - Palermo           .1000
               pop13        B. rupestris subsp. hispida  Cozzo Cicero (Borgetto) - Palermo  51–100
               pop14        B. incana               Gonato - Madonie - Palermo          101–500
               pop15        B. incana               Passo della Zita (Longi) - Messina  101–500
               pop16        B. macrocarpa           M. S. Caterina (Favignana, Isole Egadi) - Trapani  501–1000




                                                               Data analysis

                                                               For each locus the resulting zymograms were inter-
                                                               pretated as allelic frequencies. For all populations
                                                               levels of allozyme diversity were estimated. A locus
                                                               was considered as polymorphic if the most common
                                                               allele was present at the frequency , 0.95 (P 95) or ,
                                                               0.99 (P 99).
                                                                 Wright (1951) fixation (F) index was calculated as
                                                               F 5 12Ho/He with Ho, the observed heterozygosity
                                                               (percentage of heterozygous for each population and
                                                               locus) and He, the expected heterozygosity calculated
                                                               from allelic frequencies according to the Hardy-Wein-
                                                               berg law. Chi-square test was used to evaluate the
                                                               significativity of the deviation from the Hardy-Wein-
                                                               berg law.
                                                                 For each population gene diversity, H, as described
                                                               by Nei (1973), was calculated for each polymorphic
                                                               locus.
                                                                 For each polymorphic locus genetic diversity in the
                                                               total populations (Ht), mean genetic diversity within
                                                               populations (Hs), the average genetic diversity among
                                                               populations (Dst) and the relative magnitude of gene
                                                               differentiation occurring among populations (Gst)
                                                               were calculated (Nei 1973).
                                                                 Genetic distances among populations were esti-
                                                               mated from allelic frequencies (Nei 1972) using
                                                               BIOSYS-1 program (Swofford and Selander 1989).
                                                                 Dendrogram was then computed from the distance
                                                               matrices using UPGMA option of the NEIGHBOR
               Figure 2. Zymograms of: (a) Pgi-2 (pop8), (b) Pgm-2 (pop9), (c)  program of Phylogeny Inference Package (PHYLIP
               Lap-1 (pop7). Allelic interpretation of bands is shown.  3.5c., Felsenstein 1993).
   1   2   3   4   5   6   7   8